BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017F02LP1|AL427182
(1013 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig807 641 0.0
3x_Contig136 534 e-151
>3x_Contig807
Length = 2821
Score = 641 bits (323), Expect = 0.0
Identities = 337/341 (98%), Gaps = 1/341 (0%)
Strand = Plus / Plus
Query: 673 gagatgggataccaatgtgtcctttctgtacttaggaaacaagtgagcaggatctttttt 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 gagatgggataccaatgtgtcctttctgtacttaggaaacaagtgagcaggatctttttt 73
Query: 733 taaacaattttccttcaatacggagtccgggaattacacttttgtcattcccggatctgt 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 taaacaattttccttcaatacggagtccgggaattacacttttgtcattcccggatctgt 133
Query: 793 agaatctcgccctattcggttccagttttactaacaaaatttacaactgtaaattcaatt 852
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 aaaatctcgccctattcggttccagttttactaacaaaatttacaactgtaaattcaatt 193
Query: 853 aaggtcgtactgatgctccattcaacaaggttatcttgaagtctttgttcttgtccaaga 912
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 194 aaggtcgtactgatgctccattcaacaaggttatcttgaagtctttgttcttgtccaaaa 253
Query: 913 tcaacagaaccaccagtttctgtttccagaatctctagagccttgaagcaagaaggtgct 972
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tcaacag-accaccagtttctgtttccagaatctctagagccttgaagcaagaaggtgct 312
Query: 973 gctcaaaagaccattgtcgttgttggtamtgttaccgatga 1013
|||||||||||||||||||||||||||| ||||||||||||
Sbjct: 313 gctcaaaagaccattgtcgttgttggtactgttaccgatga 353
>3x_Contig136
Length = 535
Score = 534 bits (269), Expect = e-151
Identities = 284/289 (98%)
Strand = Plus / Plus
Query: 1 ctgtttgagaatgtacggatgtagttttttcaaaactagaaaaccaacaatatattacct 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 247 ctgtttgagaatgtacggatgtagttttttcaaaactagaaaaccatcaatatattacct 306
Query: 61 aaataggaataaagttttcaaaactcatcaactcactgacatcgacaaatttcacatcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 307 aaataggaataaagttttcaaaactcatcaactcactgacatcgacaaatttcacattgt 366
Query: 121 tacgagtagtgcatatatgaagaaaccatctttcaatacagttaatcataccattaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tacgagtagtgcatatatgaagaaaccatctttcaatacagttaatcataccattaagca 426
Query: 181 tatgttctaatgtactattatctcgattaattcttgaaagaacacacacaataagcaagt 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 427 tatgttctaatgtactattatctcgattaattcttgatagaacacacacaataagcaagt 486
Query: 241 ctcaaaatgggtattgatcacacttccaagcaacacaagagatccagtc 289
||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 487 ctcaaaatgggtattgatcacactttctagcaacacaagagatccagtc 535
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8312
Number of Sequences: 1807
Number of extensions: 8312
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 2
length of query: 1013
length of database: 10,358,551
effective HSP length: 16
effective length of query: 997
effective length of database: 10,329,639
effective search space: 10298650083
effective search space used: 10298650083
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)